STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIFM3Rieske domain-containing protein. (287 aa)    
Predicted Functional Partners:
W5Q565_SHEEP
Uncharacterized protein.
 
     0.939
BMS1
BMS1 ribosome biogenesis factor.
      
 0.692
ARFGAP3
ADP ribosylation factor GTPase activating protein 3.
      
 0.692
SRP54
Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily.
     
 0.687
UBASH3A
Ubiquitin associated and SH3 domain containing A.
    
 
 0.684
RNF165
Ring finger protein 165.
   
  
 0.667
PIPOX
Pipecolic acid and sarcosine oxidase.
  
 0.646
DDO
D-aspartate oxidase.
  
 0.646
ACOD1
Aconitate decarboxylase 1.
  
 0.646
DAO
D-amino acid oxidase.
  
 0.646
Your Current Organism:
Ovis aries
NCBI taxonomy Id: 9940
Other names: O. aries, Ovis ammon aries, Ovis orientalis aries, Ovis ovis, domestic sheep, lambs, sheep, wild sheep
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