STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NPEPL1Aminopeptidase like 1. (480 aa)    
Predicted Functional Partners:
C20orf85
Chromosome 20 open reading frame 85.
      
 0.831
NCOA5
Nuclear receptor coactivator 5.
      
 0.825
DDX27
DEAD-box helicase 27; Belongs to the DEAD box helicase family.
      
 0.779
STX16-NPEPL1
t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.
 
 
  
 0.779
RNF145
Ring finger protein 145.
      
 0.757
PRPF19
Pre-mRNA processing factor 19.
   
 
 0.726
ZSCAN26
SCAN box domain-containing protein.
     
 0.714
ELMO2
Engulfment and cell motility 2.
      
 0.693
MMP25
Matrix metallopeptidase 25.
      
 0.688
USP39
Ubiquitin specific peptidase 39.
      
 0.671
Your Current Organism:
Ovis aries
NCBI taxonomy Id: 9940
Other names: O. aries, Ovis ammon aries, Ovis orientalis aries, Ovis ovis, domestic sheep, lambs, sheep, wild sheep
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