Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ATG101 | ATG13 | ENSOARP00000018458 | ENSOARP00000004058 | Autophagy related 101. | Autophagy-related protein 13; Belongs to the ATG13 family. Metazoan subfamily. | 0.999 |
ATG101 | C9orf72 | ENSOARP00000018458 | ENSOARP00000015747 | Autophagy related 101. | C9orf72-SMCR8 complex subunit. | 0.979 |
ATG101 | RB1CC1 | ENSOARP00000018458 | ENSOARP00000014625 | Autophagy related 101. | RB1 inducible coiled-coil 1. | 0.999 |
ATG101 | SMCR8 | ENSOARP00000018458 | ENSOARP00000019978 | Autophagy related 101. | SMCR8-C9orf72 complex subunit. | 0.812 |
ATG101 | WDR41 | ENSOARP00000018458 | ENSOARP00000018308 | Autophagy related 101. | WD repeat domain 41. | 0.820 |
ATG13 | ATG101 | ENSOARP00000004058 | ENSOARP00000018458 | Autophagy-related protein 13; Belongs to the ATG13 family. Metazoan subfamily. | Autophagy related 101. | 0.999 |
ATG13 | C9orf72 | ENSOARP00000004058 | ENSOARP00000015747 | Autophagy-related protein 13; Belongs to the ATG13 family. Metazoan subfamily. | C9orf72-SMCR8 complex subunit. | 0.912 |
ATG13 | RB1CC1 | ENSOARP00000004058 | ENSOARP00000014625 | Autophagy-related protein 13; Belongs to the ATG13 family. Metazoan subfamily. | RB1 inducible coiled-coil 1. | 0.999 |
ATG13 | SMCR8 | ENSOARP00000004058 | ENSOARP00000019978 | Autophagy-related protein 13; Belongs to the ATG13 family. Metazoan subfamily. | SMCR8-C9orf72 complex subunit. | 0.747 |
ATG13 | WDR41 | ENSOARP00000004058 | ENSOARP00000018308 | Autophagy-related protein 13; Belongs to the ATG13 family. Metazoan subfamily. | WD repeat domain 41. | 0.736 |
C9orf72 | ATG101 | ENSOARP00000015747 | ENSOARP00000018458 | C9orf72-SMCR8 complex subunit. | Autophagy related 101. | 0.979 |
C9orf72 | ATG13 | ENSOARP00000015747 | ENSOARP00000004058 | C9orf72-SMCR8 complex subunit. | Autophagy-related protein 13; Belongs to the ATG13 family. Metazoan subfamily. | 0.912 |
C9orf72 | RAB39B | ENSOARP00000015747 | ENSOARP00000003927 | C9orf72-SMCR8 complex subunit. | RAB39B, member RAS oncogene family. | 0.966 |
C9orf72 | RAB8A | ENSOARP00000015747 | ENSOARP00000000637 | C9orf72-SMCR8 complex subunit. | RAB8A. | 0.929 |
C9orf72 | RB1CC1 | ENSOARP00000015747 | ENSOARP00000014625 | C9orf72-SMCR8 complex subunit. | RB1 inducible coiled-coil 1. | 0.936 |
C9orf72 | SMCR8 | ENSOARP00000015747 | ENSOARP00000019978 | C9orf72-SMCR8 complex subunit. | SMCR8-C9orf72 complex subunit. | 0.996 |
C9orf72 | WDR41 | ENSOARP00000015747 | ENSOARP00000018308 | C9orf72-SMCR8 complex subunit. | WD repeat domain 41. | 0.992 |
CDC27 | CDC6 | ENSOARP00000012487 | ENSOARP00000015098 | Cell division cycle 27. | Cell division control protein; Involved in the initiation of DNA replication. Also participates in checkpoint controls that ensure DNA replication is completed before mitosis is initiated; Belongs to the CDC6/cdc18 family. | 0.811 |
CDC27 | WDR41 | ENSOARP00000012487 | ENSOARP00000018308 | Cell division cycle 27. | WD repeat domain 41. | 0.709 |
CDC6 | CDC27 | ENSOARP00000015098 | ENSOARP00000012487 | Cell division control protein; Involved in the initiation of DNA replication. Also participates in checkpoint controls that ensure DNA replication is completed before mitosis is initiated; Belongs to the CDC6/cdc18 family. | Cell division cycle 27. | 0.811 |
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