STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NXF1Nuclear RNA export factor 1. (634 aa)    
Predicted Functional Partners:
RAE1
Ribonucleic acid export 1.
    
 0.997
ALYREF
Aly/REF export factor.
    
 0.996
THOC5
THO complex 5.
    
 0.980
LOC101109079
NTF2 domain-containing protein.
    
 0.967
SRSF7
Serine and arginine rich splicing factor 7.
   
 0.958
NUP42
Nucleoporin 42.
    
 0.958
NUP214
Nucleoporin 214.
   
 0.953
SRSF3
Pre-mRNA splicing factor SRP20-like protein.
    
 0.953
SRSF4
Serine and arginine rich splicing factor 4.
   
 0.947
SRSF6-2
RRM domain-containing protein.
   
 0.946
Your Current Organism:
Ovis aries
NCBI taxonomy Id: 9940
Other names: O. aries, Ovis ammon aries, Ovis orientalis aries, Ovis ovis, domestic sheep, lambs, sheep, wild sheep
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.