Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
COL1A2 | FBN1 | ENSOARP00000001581 | ENSOARP00000022590 | Collagen type I alpha 2 chain. | Fibrillin 1. | 0.879 |
COL1A2 | MMP2 | ENSOARP00000001581 | ENSOARP00000019362 | Collagen type I alpha 2 chain. | Uncharacterized protein. | 0.991 |
COL1A2 | MMP9 | ENSOARP00000001581 | ENSOARP00000008487 | Collagen type I alpha 2 chain. | Matrix metallopeptidase 9. | 0.642 |
COL1A2 | THBS1 | ENSOARP00000001581 | ENSOARP00000021538 | Collagen type I alpha 2 chain. | Thrombospondin 1. | 0.532 |
COL1A2 | TIMP3 | ENSOARP00000001581 | ENSOARP00000019543 | Collagen type I alpha 2 chain. | Metallopeptidase inhibitor 3. | 0.533 |
FBN1 | COL1A2 | ENSOARP00000022590 | ENSOARP00000001581 | Fibrillin 1. | Collagen type I alpha 2 chain. | 0.879 |
FBN1 | MMP2 | ENSOARP00000022590 | ENSOARP00000019362 | Fibrillin 1. | Uncharacterized protein. | 0.946 |
FBN1 | MMP9 | ENSOARP00000022590 | ENSOARP00000008487 | Fibrillin 1. | Matrix metallopeptidase 9. | 0.521 |
FBN1 | THBS1 | ENSOARP00000022590 | ENSOARP00000021538 | Fibrillin 1. | Thrombospondin 1. | 0.584 |
FBN1 | TIMP3 | ENSOARP00000022590 | ENSOARP00000019543 | Fibrillin 1. | Metallopeptidase inhibitor 3. | 0.465 |
MMP1 | MMP14 | ENSOARP00000005708 | ENSOARP00000020855 | Matrix metallopeptidase 1. | ZnMc domain-containing protein. | 0.495 |
MMP1 | MMP2 | ENSOARP00000005708 | ENSOARP00000019362 | Matrix metallopeptidase 1. | Uncharacterized protein. | 0.973 |
MMP1 | MMP9 | ENSOARP00000005708 | ENSOARP00000008487 | Matrix metallopeptidase 1. | Matrix metallopeptidase 9. | 0.968 |
MMP1 | TIMP2 | ENSOARP00000005708 | ENSOARP00000003474 | Matrix metallopeptidase 1. | NTR domain-containing protein. | 0.834 |
MMP1 | TIMP3 | ENSOARP00000005708 | ENSOARP00000019543 | Matrix metallopeptidase 1. | Metallopeptidase inhibitor 3. | 0.701 |
MMP14 | MMP1 | ENSOARP00000020855 | ENSOARP00000005708 | ZnMc domain-containing protein. | Matrix metallopeptidase 1. | 0.495 |
MMP14 | MMP2 | ENSOARP00000020855 | ENSOARP00000019362 | ZnMc domain-containing protein. | Uncharacterized protein. | 0.966 |
MMP14 | MMP9 | ENSOARP00000020855 | ENSOARP00000008487 | ZnMc domain-containing protein. | Matrix metallopeptidase 9. | 0.526 |
MMP14 | SRC | ENSOARP00000020855 | ENSOARP00000019257 | ZnMc domain-containing protein. | Tyrosine-protein kinase. | 0.640 |
MMP14 | TIMP2 | ENSOARP00000020855 | ENSOARP00000003474 | ZnMc domain-containing protein. | NTR domain-containing protein. | 0.999 |
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