STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SARS1Seryl-tRNA synthetase. (514 aa)    
Predicted Functional Partners:
PSTK
Phosphoseryl-tRNA kinase.
     
 0.989
GARS1
Glycyl-tRNA synthetase.
   
  
 0.949
SEPSECS
O-phosphoseryl-tRNA(Sec) selenium transferase; Converts O-phosphoseryl-tRNA(Sec) to selenocysteinyl- tRNA(Sec) required for selenoprotein biosynthesis.
     
 0.893
YARS1
Tyrosine--tRNA ligase.
  
  
 0.891
SUPT3H
SPT3 homolog, SAGA and STAGA complex component.
    
 
 0.827
TADA2A
Transcriptional adapter.
    
 
 0.819
SGF29
SAGA complex associated factor 29.
    
 
 0.814
TAF10
TATA-box binding protein associated factor 10.
   
 
 0.810
TAF12
TATA-box binding protein associated factor 12.
    
 
 0.801
TAF9B
TATA-box binding protein associated factor 9b.
    
 
 0.801
Your Current Organism:
Ovis aries
NCBI taxonomy Id: 9940
Other names: O. aries, Ovis ammon aries, Ovis orientalis aries, Ovis ovis, domestic sheep, lambs, sheep, wild sheep
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