TRDC protein (Ovis aries) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Current Organism:

Ovis aries

NCBI taxonomy Id: 9940
Other names: O. aries, Ovis ammon aries, Ovis orientalis aries, Ovis ovis, domestic sheep, lambs, sheep, wild sheep

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CHCHD4	TIMM10	ENSOARP00000001273	ENSOARP00000010649	Coiled-coil-helix-coiled-coil-helix domain containing 4.	Translocase of inner mitochondrial membrane 10.	0.927
CHCHD4	TRDC	ENSOARP00000001273	ENSOARP00000020890	Coiled-coil-helix-coiled-coil-helix domain containing 4.	T cell receptor delta constant.	0.726
DAD1	OR10G2	ENSOARP00000020881	ENSOARP00000013035	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1; Subunit of the oligosaccharyl transferase (OST) complex that catalyzes the initial transfer of a defined glycan (Glc(3)Man(9)GlcNAc(2) in eukaryotes) from the lipid carrier dolichol- pyrophosphate to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains, the first step in protein N-glycosylation. N-glycosylation occurs cotranslationally and the complex associates with the Sec61 complex at the channel-forming translocon complex that mediates protein translocation across the [...]	Olfactory receptor family 10 subfamily G member 2.	0.663
DAD1	STARD3NL	ENSOARP00000020881	ENSOARP00000009707	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1; Subunit of the oligosaccharyl transferase (OST) complex that catalyzes the initial transfer of a defined glycan (Glc(3)Man(9)GlcNAc(2) in eukaryotes) from the lipid carrier dolichol- pyrophosphate to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains, the first step in protein N-glycosylation. N-glycosylation occurs cotranslationally and the complex associates with the Sec61 complex at the channel-forming translocon complex that mediates protein translocation across the [...]	STARD3 N-terminal like.	0.773
DAD1	TRAV18	ENSOARP00000020881	ENSOARP00000002749	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1; Subunit of the oligosaccharyl transferase (OST) complex that catalyzes the initial transfer of a defined glycan (Glc(3)Man(9)GlcNAc(2) in eukaryotes) from the lipid carrier dolichol- pyrophosphate to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains, the first step in protein N-glycosylation. N-glycosylation occurs cotranslationally and the complex associates with the Sec61 complex at the channel-forming translocon complex that mediates protein translocation across the [...]	T cell receptor alpha variable 18.	0.575
DAD1	TRDC	ENSOARP00000020881	ENSOARP00000020890	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1; Subunit of the oligosaccharyl transferase (OST) complex that catalyzes the initial transfer of a defined glycan (Glc(3)Man(9)GlcNAc(2) in eukaryotes) from the lipid carrier dolichol- pyrophosphate to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains, the first step in protein N-glycosylation. N-glycosylation occurs cotranslationally and the complex associates with the Sec61 complex at the channel-forming translocon complex that mediates protein translocation across the [...]	T cell receptor delta constant.	0.823
DAD1	TRDV3	ENSOARP00000020881	ENSOARP00000012795	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1; Subunit of the oligosaccharyl transferase (OST) complex that catalyzes the initial transfer of a defined glycan (Glc(3)Man(9)GlcNAc(2) in eukaryotes) from the lipid carrier dolichol- pyrophosphate to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains, the first step in protein N-glycosylation. N-glycosylation occurs cotranslationally and the complex associates with the Sec61 complex at the channel-forming translocon complex that mediates protein translocation across the [...]	T cell receptor delta variable 3.	0.539
LOC101118849	TIMM10	ENSOARP00000002512	ENSOARP00000010649	Mitochondrial import inner membrane translocase subunit TIM23; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane.	Translocase of inner mitochondrial membrane 10.	0.863
LOC101118849	TRDC	ENSOARP00000002512	ENSOARP00000020890	Mitochondrial import inner membrane translocase subunit TIM23; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane.	T cell receptor delta constant.	0.727
OR10G2	DAD1	ENSOARP00000013035	ENSOARP00000020881	Olfactory receptor family 10 subfamily G member 2.	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1; Subunit of the oligosaccharyl transferase (OST) complex that catalyzes the initial transfer of a defined glycan (Glc(3)Man(9)GlcNAc(2) in eukaryotes) from the lipid carrier dolichol- pyrophosphate to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains, the first step in protein N-glycosylation. N-glycosylation occurs cotranslationally and the complex associates with the Sec61 complex at the channel-forming translocon complex that mediates protein translocation across the [...]	0.663
OR10G2	STARD3NL	ENSOARP00000013035	ENSOARP00000009707	Olfactory receptor family 10 subfamily G member 2.	STARD3 N-terminal like.	0.699
OR10G2	TRAV16	ENSOARP00000013035	ENSOARP00000020988	Olfactory receptor family 10 subfamily G member 2.	T cell receptor alpha variable 16.	0.628
OR10G2	TRAV18	ENSOARP00000013035	ENSOARP00000002749	Olfactory receptor family 10 subfamily G member 2.	T cell receptor alpha variable 18.	0.545
OR10G2	TRDC	ENSOARP00000013035	ENSOARP00000020890	Olfactory receptor family 10 subfamily G member 2.	T cell receptor delta constant.	0.786
OR10G2	TRDV2	ENSOARP00000013035	ENSOARP00000020891	Olfactory receptor family 10 subfamily G member 2.	T cell receptor delta variable 2.	0.409
OR10G2	TRDV3	ENSOARP00000013035	ENSOARP00000012795	Olfactory receptor family 10 subfamily G member 2.	T cell receptor delta variable 3.	0.587
STARD3NL	DAD1	ENSOARP00000009707	ENSOARP00000020881	STARD3 N-terminal like.	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1; Subunit of the oligosaccharyl transferase (OST) complex that catalyzes the initial transfer of a defined glycan (Glc(3)Man(9)GlcNAc(2) in eukaryotes) from the lipid carrier dolichol- pyrophosphate to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains, the first step in protein N-glycosylation. N-glycosylation occurs cotranslationally and the complex associates with the Sec61 complex at the channel-forming translocon complex that mediates protein translocation across the [...]	0.773
STARD3NL	OR10G2	ENSOARP00000009707	ENSOARP00000013035	STARD3 N-terminal like.	Olfactory receptor family 10 subfamily G member 2.	0.699
STARD3NL	TRAV16	ENSOARP00000009707	ENSOARP00000020988	STARD3 N-terminal like.	T cell receptor alpha variable 16.	0.545
STARD3NL	TRAV18	ENSOARP00000009707	ENSOARP00000002749	STARD3 N-terminal like.	T cell receptor alpha variable 18.	0.671