STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEC22ASEC22 homolog A, vesicle trafficking protein; Belongs to the synaptobrevin family. (326 aa)    
Predicted Functional Partners:
STX5
Syntaxin 5; Belongs to the syntaxin family.
   
 0.971
TRAPPC5
Trafficking protein particle complex subunit 5; May play a role in vesicular transport from endoplasmic reticulum to Golgi.
   
 
 0.946
GOSR2
Uncharacterized protein; Involved in transport of proteins from the cis/medial-Golgi to the trans-Golgi network.
    
 0.920
ARFIP1
ADP ribosylation factor interacting protein 1.
      
 0.889
GOLGA2
Uncharacterized protein.
     
 0.885
STX17
Syntaxin 17; Belongs to the syntaxin family.
    
 0.882
SCFD1
Sec1 family domain containing 1; Belongs to the STXBP/unc-18/SEC1 family.
   
 0.880
BET1
t-SNARE coiled-coil homology domain-containing protein.
   
 0.876
W5QG82_SHEEP
t-SNARE coiled-coil homology domain-containing protein.
   
 0.876
STX18
Syntaxin 18.
   
 0.868
Your Current Organism:
Ovis aries
NCBI taxonomy Id: 9940
Other names: O. aries, Ovis ammon aries, Ovis orientalis aries, Ovis ovis, domestic sheep, lambs, sheep, wild sheep
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