STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAB27ARAB27A, member RAS oncogene family. (221 aa)    
Predicted Functional Partners:
MYO5A
Myosin VA; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
 0.986
CD63
Tetraspanin.
     
 0.923
RAB27B
RAB27B, member RAS oncogene family.
  
  
0.876
TYR
Uncharacterized protein.
   
 
 0.875
SYTL2
Synaptotagmin like 2.
   
 
 0.843
SYTL4
Synaptotagmin like 4.
   
 
 0.825
DCT
Uncharacterized protein.
      
 0.793
SYTL3
Synaptotagmin like 3.
   
 
 0.780
SYTL5
Synaptotagmin like 5.
   
 
 0.778
SYTL1
Synaptotagmin like 1.
   
 
 0.707
Your Current Organism:
Ovis aries
NCBI taxonomy Id: 9940
Other names: O. aries, Ovis ammon aries, Ovis orientalis aries, Ovis ovis, domestic sheep, lambs, sheep, wild sheep
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