Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
COX3 | PCNX1 | ENSOARP00000000007 | ENSOARP00000022785 | Cytochrome c oxidase subunit 3; Component of the cytochrome c oxidase, the last enzyme in the mitochondrial electron transport chain which drives oxidative phosphorylation. The respiratory chain contains 3 multisubunit complexes succinate dehydrogenase (complex II, CII), ubiquinol- cytochrome c oxidoreductase (cytochrome b-c1 complex, complex III, CIII) and cytochrome c oxidase (complex IV, CIV), that cooperate to transfer electrons derived from NADH and succinate to molecular oxygen, creating an electrochemical gradient over the inner membrane that drives transmembrane transport and t [...] | Pecanex 1. | 0.531 |
MOV10L1 | PCNX1 | ENSOARP00000021177 | ENSOARP00000022785 | Mov10 like RISC complex RNA helicase 1. | Pecanex 1. | 0.885 |
MOV10L1 | STK31 | ENSOARP00000021177 | ENSOARP00000011864 | Mov10 like RISC complex RNA helicase 1. | Serine/threonine kinase 31. | 0.758 |
MOV10L1 | TEX11 | ENSOARP00000021177 | ENSOARP00000017108 | Mov10 like RISC complex RNA helicase 1. | Testis expressed 11. | 0.783 |
PCNX1 | COX3 | ENSOARP00000022785 | ENSOARP00000000007 | Pecanex 1. | Cytochrome c oxidase subunit 3; Component of the cytochrome c oxidase, the last enzyme in the mitochondrial electron transport chain which drives oxidative phosphorylation. The respiratory chain contains 3 multisubunit complexes succinate dehydrogenase (complex II, CII), ubiquinol- cytochrome c oxidoreductase (cytochrome b-c1 complex, complex III, CIII) and cytochrome c oxidase (complex IV, CIV), that cooperate to transfer electrons derived from NADH and succinate to molecular oxygen, creating an electrochemical gradient over the inner membrane that drives transmembrane transport and t [...] | 0.531 |
PCNX1 | MOV10L1 | ENSOARP00000022785 | ENSOARP00000021177 | Pecanex 1. | Mov10 like RISC complex RNA helicase 1. | 0.885 |
PCNX1 | STK31 | ENSOARP00000022785 | ENSOARP00000011864 | Pecanex 1. | Serine/threonine kinase 31. | 0.932 |
PCNX1 | TEX11 | ENSOARP00000022785 | ENSOARP00000017108 | Pecanex 1. | Testis expressed 11. | 0.809 |
PCNX1 | W5P5E4_SHEEP | ENSOARP00000022785 | ENSOARP00000005647 | Pecanex 1. | DNA_MISMATCH_REPAIR_2 domain-containing protein. | 0.489 |
PCNX1 | W5PQH6_SHEEP | ENSOARP00000022785 | ENSOARP00000012703 | Pecanex 1. | S1-like domain-containing protein. | 0.512 |
STK31 | MOV10L1 | ENSOARP00000011864 | ENSOARP00000021177 | Serine/threonine kinase 31. | Mov10 like RISC complex RNA helicase 1. | 0.758 |
STK31 | PCNX1 | ENSOARP00000011864 | ENSOARP00000022785 | Serine/threonine kinase 31. | Pecanex 1. | 0.932 |
STK31 | TEX11 | ENSOARP00000011864 | ENSOARP00000017108 | Serine/threonine kinase 31. | Testis expressed 11. | 0.682 |
STK31 | W5P5E4_SHEEP | ENSOARP00000011864 | ENSOARP00000005647 | Serine/threonine kinase 31. | DNA_MISMATCH_REPAIR_2 domain-containing protein. | 0.693 |
TEX11 | MOV10L1 | ENSOARP00000017108 | ENSOARP00000021177 | Testis expressed 11. | Mov10 like RISC complex RNA helicase 1. | 0.783 |
TEX11 | PCNX1 | ENSOARP00000017108 | ENSOARP00000022785 | Testis expressed 11. | Pecanex 1. | 0.809 |
TEX11 | STK31 | ENSOARP00000017108 | ENSOARP00000011864 | Testis expressed 11. | Serine/threonine kinase 31. | 0.682 |
TEX11 | W5P5E4_SHEEP | ENSOARP00000017108 | ENSOARP00000005647 | Testis expressed 11. | DNA_MISMATCH_REPAIR_2 domain-containing protein. | 0.568 |
W5P5E4_SHEEP | PCNX1 | ENSOARP00000005647 | ENSOARP00000022785 | DNA_MISMATCH_REPAIR_2 domain-containing protein. | Pecanex 1. | 0.489 |
W5P5E4_SHEEP | STK31 | ENSOARP00000005647 | ENSOARP00000011864 | DNA_MISMATCH_REPAIR_2 domain-containing protein. | Serine/threonine kinase 31. | 0.693 |
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