STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A8926_6569Unannotated protein. (415 aa)    
Predicted Functional Partners:
A8926_0359
Unannotated protein.
 
 
   0.853
A8926_0062
Unannotated protein.
  
 
  0.810
A8926_0063
Unannotated protein.
  
   0.779
A8926_2776
Unannotated protein.
  
  
  0.773
A8926_0061
Unannotated protein.
  
     0.773
A8926_4871
Unannotated protein.
  
  0.767
A8926_7265
Unannotated protein.
  
     0.765
A8926_0356
Unannotated protein; Belongs to the WXG100 family.
  
   0.764
A8926_8092
Unannotated protein.
  
     0.763
A8926_1339
Unannotated protein.
  
     0.762
Your Current Organism:
Saccharopolyspora spinosa
NCBI taxonomy Id: 994479
Other names: S. spinosa NRRL 18395, Saccharopolyspora spinosa DSM 44228, Saccharopolyspora spinosa NRRL 18395, Saccharopolyspora spinosa str. NRRL 18395, Saccharopolyspora spinosa strain NRRL 18395
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.