STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A8926_0940Unannotated protein. (215 aa)    
Predicted Functional Partners:
A8926_2181
Unannotated protein.
  
 0.854
A8926_6246
Unannotated protein.
  
 0.854
A8926_6249
Unannotated protein.
  
 0.854
A8926_6250
Unannotated protein.
  
 0.854
A8926_0430
Unannotated protein.
   
  0.810
A8926_6241
Unannotated protein.
 
 0.802
GCA_000194155_00701
Unannotated protein.
  
  0.786
A8926_7465
Unannotated protein.
  
  0.786
A8926_6239
Unannotated protein.
  
  0.786
A8926_6251
Unannotated protein.
  
 0.776
Your Current Organism:
Saccharopolyspora spinosa
NCBI taxonomy Id: 994479
Other names: S. spinosa NRRL 18395, Saccharopolyspora spinosa DSM 44228, Saccharopolyspora spinosa NRRL 18395, Saccharopolyspora spinosa str. NRRL 18395, Saccharopolyspora spinosa strain NRRL 18395
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.