STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEA70747.1Putative transcription factor, LysR family; Belongs to the LysR transcriptional regulatory family. (315 aa)    
Predicted Functional Partners:
AEA69411.1
Putative Transcription factor, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.660
AEA72176.1
Putative transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.638
AEA68771.1
Putative Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.630
AEA71024.1
Putative transcription factor, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.606
AEA70749.1
Conserved hypothetical protein.
       0.604
AEA70748.1
Putative transferase.
       0.582
AEA69980.1
Putative Transcription factor, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.543
AEA70746.1
Conserved hypothetical protein.
       0.536
AEA70129.1
Putative Transcription factor, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.531
AEA68474.1
Putative transcription factor, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.506
Your Current Organism:
Pseudomonas brassicacearum
NCBI taxonomy Id: 994484
Other names: P. brassicacearum subsp. brassicacearum NFM421, Pseudomonas brassicacearum subsp. brassicacearum CFBP 11874, Pseudomonas brassicacearum subsp. brassicacearum NFM421, Pseudomonas brassicacearum subsp. brassicacearum str. NFM421, Pseudomonas brassicacearum subsp. brassicacearum strain NFM421
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.