STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ETA82190.1Hypothetical protein. (455 aa)    
Predicted Functional Partners:
ETA82191.1
Beta-lactamase.
     0.991
ETA79589.1
Pyruvate-flavodoxin oxidoreductase.
    
  0.853
ETA79259.1
Beta-lactamase.
     0.819
ETA79148.1
Glyoxalase.
    
 0.810
ETA82192.1
3-hydroxy-3-methylglutaryl-CoA reductase; Belongs to the HMG-CoA reductase family.
 
  
 0.806
ETA82194.1
Tripartite tricarboxylate transporter TctA family protein.
 
     0.752
ETA79204.1
Acetaldehyde dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
 
 0.749
ETA80247.1
acetyl-CoA carboxylase biotin carboxylase subunit; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.
  
 
 0.705
ETA82193.1
Hypothetical protein.
       0.702
ETA80372.1
2-oxoacid:ferredoxin oxidoreductase subunit alpha.
    
  0.631
Your Current Organism:
Youngiibacter fragilis
NCBI taxonomy Id: 994573
Other names: Clostridium sp. 232.1, Y. fragilis 232.1, Youngiibacter fragile 232.1, Youngiibacter fragilis 232.1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.