STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ETA82198.1Lactate dehydrogenase; Belongs to the LDH2/MDH2 oxidoreductase family. (367 aa)    
Predicted Functional Partners:
comB
2-phosphosulfolactate phosphatase; Catalyzes the formation of (2R)-3-sulfolactate from (2R)-2-phospho-3-sulfolactate; Belongs to the ComB family.
  
  
 0.832
ETA79589.1
Pyruvate-flavodoxin oxidoreductase.
     
 0.819
ETA80372.1
2-oxoacid:ferredoxin oxidoreductase subunit alpha.
     
 0.738
ETA80754.1
Malate dehydrogenase.
    
 0.553
ETA80725.1
Pyruvate kinase; Catalyzes the formation of phosphoenolpyruvate from pyruvate; Belongs to the pyruvate kinase family.
     
 0.539
ETA81621.1
Catalyzes the formation of cystathionine from L-cysteine and O-succinyl-L-homoserine.
 
   
 0.488
ETA80499.1
Catalyzes the formation of 2-acetolactate from pyruvate; also known as acetolactate synthase large subunit.
   
 
 0.488
ETA82580.1
Xylulokinase; Belongs to the FGGY kinase family.
    
  0.483
ETA81673.1
Carbohydrate kinase; Belongs to the FGGY kinase family.
    
  0.483
pgi
Glucose-6-phosphate isomerase; Functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways (EMP) and in gluconeogenesis; catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate; member of PGI family; Belongs to the GPI family.
     
 0.479
Your Current Organism:
Youngiibacter fragilis
NCBI taxonomy Id: 994573
Other names: Clostridium sp. 232.1, Y. fragilis 232.1, Youngiibacter fragile 232.1, Youngiibacter fragilis 232.1
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