STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ETA82205.1Pilin. (144 aa)    
Predicted Functional Partners:
ETA82209.1
Hypothetical protein.
 
 0.971
ETA82210.1
Hypothetical protein.
 
  
 0.957
ETA82434.1
Type II secretion system protein E.
 
 0.934
ETA82433.1
Hypothetical protein.
 
  
 0.910
ETA79684.1
Hypothetical protein.
   
  
 0.748
ETA82204.1
Peptidase A24.
 
  
 0.739
ETA82203.1
Twitching motility protein PilT.
 
  
 0.677
ETA82211.1
Hypothetical protein.
  
  
 0.640
ETA79128.1
Twitching motility protein pilT.
 
  
 0.640
ETA82007.1
DNA processing protein DprA.
 
  
 0.619
Your Current Organism:
Youngiibacter fragilis
NCBI taxonomy Id: 994573
Other names: Clostridium sp. 232.1, Y. fragilis 232.1, Youngiibacter fragile 232.1, Youngiibacter fragilis 232.1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.