STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ETA81952.1Nitrogen-fixing protein NifU. (142 aa)    
Predicted Functional Partners:
ETA81953.1
Cysteine desulfurase; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family.
 0.999
ETA82498.1
Cysteine desulfurase.
 
 0.998
ETA79812.1
Cysteine desulfarase.
 
 0.998
ETA81954.1
FeS assembly protein SufD.
 
  
 0.994
ETA81955.1
Fe-S cluster assembly protein SufB.
 
  
 0.992
ETA81956.1
ABC transporter ATP-binding protein.
 
  
 0.992
ETA81541.1
Hypothetical protein.
  
 
 0.988
ETA81312.1
Cysteine desulfurase.
 0.984
ETA80124.1
Cysteine desulfurase.
 0.978
dnaK
Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 
 0.974
Your Current Organism:
Youngiibacter fragilis
NCBI taxonomy Id: 994573
Other names: Clostridium sp. 232.1, Y. fragilis 232.1, Youngiibacter fragile 232.1, Youngiibacter fragilis 232.1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.