STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ETA81842.1Hypothetical protein. (357 aa)    
Predicted Functional Partners:
ETA81843.1
High light inducible protein; Phage-associated protein.
 
    0.935
ETA80784.1
C4-dicarboxylate ABC transporter.
 
    0.848
ETA81838.1
Type III effector Hrp-dependent outer protein.
 
     0.843
ETA81841.1
4-hydroxythreonine-4-phosphate dehydrogenase; Belongs to the PdxA family.
 
     0.816
dapA
Dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).
 
     0.798
ETA81845.1
Glycosyl hydrolase.
 
     0.783
ETA81839.1
Alcohol dehydrogenase.
 
     0.773
ETA81836.1
Fis family transcriptional regulator.
 
  
  0.742
ETA81844.1
YhcH/YjgK/YiaL family protein.
 
     0.738
ETA81227.1
Hypothetical protein.
  
     0.608
Your Current Organism:
Youngiibacter fragilis
NCBI taxonomy Id: 994573
Other names: Clostridium sp. 232.1, Y. fragilis 232.1, Youngiibacter fragile 232.1, Youngiibacter fragilis 232.1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.