STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ETA81706.1Membrane protein. (277 aa)    
Predicted Functional Partners:
ETA81707.1
Phosphohydrolase.
     0.919
ETA80495.1
Hypothetical protein.
 
     0.838
ETA80619.1
HD family phosphohydrolase.
     0.806
ETA81705.1
UDP pyrophosphate synthase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.
       0.705
ETA80276.1
2-hydroxyglutaryl-CoA dehydratase.
 
     0.664
ETA81708.1
Hypothetical protein.
 
     0.584
ETA81704.1
Serine protease.
 
     0.582
ETA80617.1
Hypothetical protein.
 
     0.462
ETA79278.1
Alpha/beta hydrolase.
  
     0.416
ETA81702.1
Hypothetical protein.
  
    0.408
Your Current Organism:
Youngiibacter fragilis
NCBI taxonomy Id: 994573
Other names: Clostridium sp. 232.1, Y. fragilis 232.1, Youngiibacter fragile 232.1, Youngiibacter fragilis 232.1
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