STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ETA81734.1Hypothetical protein. (182 aa)    
Predicted Functional Partners:
ETA81735.1
Hypothetical protein.
 
     0.957
ETA81737.1
Secretion protein F.
 
     0.951
ETA81738.1
Membrane protein.
 
     0.950
ETA81740.1
ATPase AAA.
 
     0.950
ETA81741.1
Flp pilus assembly protein CpaB.
 
     0.950
ETA81739.1
Type II secretion system protein E.
 
     0.948
ETA81743.1
Peptidase A24.
 
     0.924
ETA81745.1
S-layer protein.
 
     0.913
ETA81732.1
Hypothetical protein.
 
     0.883
ETA81748.1
Hypothetical protein.
 
     0.875
Your Current Organism:
Youngiibacter fragilis
NCBI taxonomy Id: 994573
Other names: Clostridium sp. 232.1, Y. fragilis 232.1, Youngiibacter fragile 232.1, Youngiibacter fragilis 232.1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.