STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ETA81183.1Hypothetical protein; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily. (487 aa)    
Predicted Functional Partners:
rnfB
Ferredoxin; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.
  
 0.979
ETA79103.1
NADH dehydrogenase.
 
 0.976
ETA80261.1
NADH dehydrogenase.
 
 0.973
ETA79785.1
Selenate reductase subunit YgfK.
  
 0.960
ETA79589.1
Pyruvate-flavodoxin oxidoreductase.
  
 
 0.958
ETA81184.1
FMN-binding protein.
  
  0.946
ETA79089.1
NADH oxidase.
 
 0.925
ETA80152.1
NADH oxidase.
   
  0.918
ETA82412.1
Tartrate dehydratase subunit alpha; Involved in the tartrate degradation pathway.
  
 
 0.874
ETA81063.1
Fumarate hydratase; Catalyzes the reversible hydration of fumaric acid to yield I-malic acid.
  
 
 0.874
Your Current Organism:
Youngiibacter fragilis
NCBI taxonomy Id: 994573
Other names: Clostridium sp. 232.1, Y. fragilis 232.1, Youngiibacter fragile 232.1, Youngiibacter fragilis 232.1
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