Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ETA79089.1 | ETA79103.1 | T472_0219055 | T472_0219130 | NADH oxidase. | NADH dehydrogenase. | 0.506 |
ETA79089.1 | ETA79589.1 | T472_0219055 | T472_0216360 | NADH oxidase. | Pyruvate-flavodoxin oxidoreductase. | 0.905 |
ETA79089.1 | ETA79785.1 | T472_0219055 | T472_0214775 | NADH oxidase. | Selenate reductase subunit YgfK. | 0.889 |
ETA79089.1 | ETA80261.1 | T472_0219055 | T472_0212960 | NADH oxidase. | NADH dehydrogenase. | 0.651 |
ETA79089.1 | ETA81183.1 | T472_0219055 | T472_0207635 | NADH oxidase. | Hypothetical protein; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily. | 0.925 |
ETA79089.1 | rnfB | T472_0219055 | T472_0204515 | NADH oxidase. | Ferredoxin; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily. | 0.838 |
ETA79103.1 | ETA79089.1 | T472_0219130 | T472_0219055 | NADH dehydrogenase. | NADH oxidase. | 0.506 |
ETA79103.1 | ETA79589.1 | T472_0219130 | T472_0216360 | NADH dehydrogenase. | Pyruvate-flavodoxin oxidoreductase. | 0.959 |
ETA79103.1 | ETA79785.1 | T472_0219130 | T472_0214775 | NADH dehydrogenase. | Selenate reductase subunit YgfK. | 0.929 |
ETA79103.1 | ETA80261.1 | T472_0219130 | T472_0212960 | NADH dehydrogenase. | NADH dehydrogenase. | 0.995 |
ETA79103.1 | ETA81063.1 | T472_0219130 | T472_0208330 | NADH dehydrogenase. | Fumarate hydratase; Catalyzes the reversible hydration of fumaric acid to yield I-malic acid. | 0.718 |
ETA79103.1 | ETA81183.1 | T472_0219130 | T472_0207635 | NADH dehydrogenase. | Hypothetical protein; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily. | 0.976 |
ETA79103.1 | ETA82412.1 | T472_0219130 | T472_0201245 | NADH dehydrogenase. | Tartrate dehydratase subunit alpha; Involved in the tartrate degradation pathway. | 0.718 |
ETA79103.1 | rnfB | T472_0219130 | T472_0204515 | NADH dehydrogenase. | Ferredoxin; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily. | 0.994 |
ETA79589.1 | ETA79089.1 | T472_0216360 | T472_0219055 | Pyruvate-flavodoxin oxidoreductase. | NADH oxidase. | 0.905 |
ETA79589.1 | ETA79103.1 | T472_0216360 | T472_0219130 | Pyruvate-flavodoxin oxidoreductase. | NADH dehydrogenase. | 0.959 |
ETA79589.1 | ETA79785.1 | T472_0216360 | T472_0214775 | Pyruvate-flavodoxin oxidoreductase. | Selenate reductase subunit YgfK. | 0.956 |
ETA79589.1 | ETA80261.1 | T472_0216360 | T472_0212960 | Pyruvate-flavodoxin oxidoreductase. | NADH dehydrogenase. | 0.996 |
ETA79589.1 | ETA81063.1 | T472_0216360 | T472_0208330 | Pyruvate-flavodoxin oxidoreductase. | Fumarate hydratase; Catalyzes the reversible hydration of fumaric acid to yield I-malic acid. | 0.624 |
ETA79589.1 | ETA81183.1 | T472_0216360 | T472_0207635 | Pyruvate-flavodoxin oxidoreductase. | Hypothetical protein; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily. | 0.958 |
page 1 of 4