STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ETA81119.1Hypothetical protein. (98 aa)    
Predicted Functional Partners:
ETA79589.1
Pyruvate-flavodoxin oxidoreductase.
  
 
 0.985
ETA79785.1
Selenate reductase subunit YgfK.
  
 0.941
ETA80372.1
2-oxoacid:ferredoxin oxidoreductase subunit alpha.
  
 
 0.938
rnfB
Ferredoxin; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.
    
 0.855
ETA79641.1
CoA-disulfide reductase; Belongs to the sulfur carrier protein TusA family.
    
 0.852
ETA80261.1
NADH dehydrogenase.
  
 
 0.850
ETA79103.1
NADH dehydrogenase.
  
 
 0.840
ETA81120.1
ArsC family transcriptional regulator; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
 
   
 0.839
ldh
L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate.
 
 
 0.831
ETA79078.1
Glutamate synthase.
    
 0.829
Your Current Organism:
Youngiibacter fragilis
NCBI taxonomy Id: 994573
Other names: Clostridium sp. 232.1, Y. fragilis 232.1, Youngiibacter fragile 232.1, Youngiibacter fragilis 232.1
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