STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ETA80897.1FMN reductase. (197 aa)    
Predicted Functional Partners:
ETA80898.1
Hypothetical protein.
       0.773
ETA81890.1
Hypothetical protein.
 
  
 0.692
ETA80899.1
Cupin.
  
    0.672
ETA79475.1
4Fe-4S ferredoxin.
 
     0.534
ETA80896.1
Fis family transcriptional regulator.
       0.472
ETA79508.1
Flavodoxin.
 
  
  0.443
ETA82274.1
Hypothetical protein.
 
  
  0.431
ETA80900.1
Hypothetical protein.
       0.417
ETA79274.1
Hypothetical protein.
 
  
 0.407
ETA82470.1
Hypothetical protein.
 
  
 0.400
Your Current Organism:
Youngiibacter fragilis
NCBI taxonomy Id: 994573
Other names: Clostridium sp. 232.1, Y. fragilis 232.1, Youngiibacter fragile 232.1, Youngiibacter fragilis 232.1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.