STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ETA80768.1Transposase. (584 aa)    
Predicted Functional Partners:
ETA80767.1
Hypothetical protein.
       0.773
ETA81227.1
Hypothetical protein.
  
     0.717
ETA80719.1
Hypothetical protein.
  
     0.702
ETA81802.1
Hypothetical protein.
  
     0.665
ETA81671.1
Nucleotidyltransferase.
  
     0.554
ETA81156.1
Transposase.
  
     0.520
ETA80766.1
Peptidase S8; Belongs to the peptidase S8 family.
       0.497
ETA81836.1
Fis family transcriptional regulator.
  
     0.490
ETA81842.1
Hypothetical protein.
  
     0.411
ETA81155.1
ATPase AAA.
  
     0.404
Your Current Organism:
Youngiibacter fragilis
NCBI taxonomy Id: 994573
Other names: Clostridium sp. 232.1, Y. fragilis 232.1, Youngiibacter fragile 232.1, Youngiibacter fragilis 232.1
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.