STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ETA80343.1ABC transporter. (265 aa)    
Predicted Functional Partners:
ETA80344.1
ABC transporter; Belongs to the binding-protein-dependent transport system permease family.
    0.982
ETA80345.1
ABC transporter substrate-binding protein.
 
    0.948
ETA81437.1
ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family.
    0.919
ETA80802.1
Multidrug ABC transporter ATP-binding protein.
 
     
0.899
ETA80873.1
ABC transporter.
 
     
0.899
ETA80801.1
ABC transporter.
 
     
0.890
pstB
Phosphate ABC transporter ATP-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.
 
     
0.883
ETA80872.1
Multidrug ABC transporter ATP-binding protein.
 
     
0.878
ETA79138.1
ABC transporter.
 
     
0.871
ETA81111.1
Hypothetical protein.
 
     
0.864
Your Current Organism:
Youngiibacter fragilis
NCBI taxonomy Id: 994573
Other names: Clostridium sp. 232.1, Y. fragilis 232.1, Youngiibacter fragile 232.1, Youngiibacter fragilis 232.1
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