STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ETA80066.1MFS transporter. (405 aa)    
Predicted Functional Partners:
ETA81533.1
Homocysteine methyltransferase.
   
 
  0.725
aroK-2
Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family.
  
 
 0.672
ETA82240.1
Chorismate mutase.
  
 
 0.655
ETA81462.1
Multidrug MFS transporter; Belongs to the major facilitator superfamily.
  
   
 0.548
ETA81549.1
Gramicidin synthetase.
  
 
 0.485
ETA81179.1
Hypothetical protein.
  
 
 0.462
ETA79085.1
Hypothetical protein.
  
 
 0.424
ETA80111.1
Hypothetical protein.
  
  
 0.412
ETA80068.1
Metallo-beta-lactamase.
     
 0.404
ETA80067.1
Hypothetical protein.
  
    0.400
Your Current Organism:
Youngiibacter fragilis
NCBI taxonomy Id: 994573
Other names: Clostridium sp. 232.1, Y. fragilis 232.1, Youngiibacter fragile 232.1, Youngiibacter fragilis 232.1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.