STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ETA79768.1Macrolide ABC transporter ATP-binding protein. (242 aa)    
Predicted Functional Partners:
ETA79769.1
Macrolide ABC transporter permease.
 0.999
ETA81539.1
Hypothetical protein.
  
 0.998
ETA81178.1
Macrolide ABC transporter permease.
 0.996
ETA79767.1
Hypothetical protein.
 
 
 0.963
ETA79300.1
Peptide ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
 
     
0.900
ETA82329.1
Permease.
 
 0.897
ETA79020.1
Hypothetical protein.
  
 0.865
ETA81179.1
Hypothetical protein.
 
 
 0.821
ETA81787.1
Sulfate ABC transporter ATP-binding protein.
 
0.813
ETA79770.1
Hypothetical protein.
       0.751
Your Current Organism:
Youngiibacter fragilis
NCBI taxonomy Id: 994573
Other names: Clostridium sp. 232.1, Y. fragilis 232.1, Youngiibacter fragile 232.1, Youngiibacter fragilis 232.1
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