STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ETA79658.1Cation diffusion facilitator family transporter; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family. (391 aa)    
Predicted Functional Partners:
ldh
L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate.
  
    0.724
ETA79856.1
Malate/lactate dehydrogenase-like protein.
  
    0.724
ETA79657.1
Aminopeptidase.
       0.636
ETA78917.1
ActP protein.
  
 
 0.464
ETA81168.1
Metallo-beta-lactamase.
 
 
  0.449
ETA79659.1
Transporter.
     
 0.429
ETA79207.1
Hypothetical protein.
   
    0.410
Your Current Organism:
Youngiibacter fragilis
NCBI taxonomy Id: 994573
Other names: Clostridium sp. 232.1, Y. fragilis 232.1, Youngiibacter fragile 232.1, Youngiibacter fragilis 232.1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.