STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ETA79676.1Hypothetical protein. (218 aa)    
Predicted Functional Partners:
ETA82201.1
Diguanylate cyclase.
  
 0.952
ETA81740.1
ATPase AAA.
  
 0.888
ETA79608.1
Sensor histidine kinase.
  
 0.873
ETA79589.1
Pyruvate-flavodoxin oxidoreductase.
    
 0.846
ribBA
3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
    
  0.792
ETA80725.1
Pyruvate kinase; Catalyzes the formation of phosphoenolpyruvate from pyruvate; Belongs to the pyruvate kinase family.
    
 0.791
ETA82253.1
FAD-dependent pyridine nucleotide-disulfide oxidoreductase.
   
 
 0.717
ETA81406.1
Hypothetical protein.
  
 0.689
ETA82200.1
Hypothetical protein.
  
 
 0.673
ETA82202.1
Hypothetical protein.
  
 
 0.673
Your Current Organism:
Youngiibacter fragilis
NCBI taxonomy Id: 994573
Other names: Clostridium sp. 232.1, Y. fragilis 232.1, Youngiibacter fragile 232.1, Youngiibacter fragilis 232.1
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