STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ETA79290.1MarR family transcriptional regulator. (111 aa)    
Predicted Functional Partners:
ETA81696.1
Growth inhibitor PemK; Toxic component of a type II toxin-antitoxin (TA) system.
   
    0.710
ETA80401.1
3-beta hydroxysteroid dehydrogenase.
 
  
 0.613
ETA79289.1
BFD-like (2Fe-2S) protein.
       0.526
ETA80069.1
Hypothetical protein; Belongs to the LysR transcriptional regulatory family.
  
  
 0.439
ETA79291.1
Metallo-beta-lactamase.
       0.422
ETA82634.1
NAD-dependent deacetylase.
  
  
 0.416
Your Current Organism:
Youngiibacter fragilis
NCBI taxonomy Id: 994573
Other names: Clostridium sp. 232.1, Y. fragilis 232.1, Youngiibacter fragile 232.1, Youngiibacter fragilis 232.1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.