STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mltGHypothetical protein; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. (339 aa)    
Predicted Functional Partners:
ETA79122.1
GTP-binding protein.
       0.809
udk
Uridine/cytidine kinase; Functions in pyrimidine salvage; pyrimidine ribonucleoside kinase; phosphorylates nucleosides or dinucleosides to make UMP or CMP using ATP or GTP as the donor.
  
    0.801
ETA79124.1
O-methyltransferase.
  
    0.798
ETA79125.1
Peptidase U32.
  
    0.796
ETA79127.1
Shikimate 5-dehydrogenase.
  
    0.720
ETA80329.1
Penicillin-binding protein 1A.
  
   
 0.623
ftsZ
Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.
 
  
 0.607
ETA79118.1
Hypothetical protein; Belongs to the UPF0473 family.
 
     0.602
rnj
Ribonuclease J; An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay.
  
    0.580
ETA80043.1
Hypothetical protein.
 
  
 0.571
Your Current Organism:
Youngiibacter fragilis
NCBI taxonomy Id: 994573
Other names: Clostridium sp. 232.1, Y. fragilis 232.1, Youngiibacter fragile 232.1, Youngiibacter fragilis 232.1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.