STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ETA79015.1Transcriptional regulator. (228 aa)    
Predicted Functional Partners:
ETA79608.1
Sensor histidine kinase.
 0.989
ETA82201.1
Diguanylate cyclase.
  
 0.988
ETA79014.1
Signal transduction histidine kinase.
 0.983
ETA79911.1
Hypothetical protein.
 0.949
ETA81911.1
Histidine kinase.
 0.948
ETA80884.1
Histidine kinase.
 0.944
ETA80816.1
Histidine kinase.
 0.943
ETA82618.1
Hypothetical protein.
 0.929
ETA80384.1
Hypothetical protein.
 0.924
ETA82505.1
Hypothetical protein.
 0.923
Your Current Organism:
Youngiibacter fragilis
NCBI taxonomy Id: 994573
Other names: Clostridium sp. 232.1, Y. fragilis 232.1, Youngiibacter fragile 232.1, Youngiibacter fragilis 232.1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.