STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFN50916.1Transcriptional regulator, ArsR family. (116 aa)    
Predicted Functional Partners:
SFN50904.1
Arsenate reductase; Belongs to the MIP/aquaporin (TC 1.A.8) family.
       0.805
SFN50931.1
Pyridine nucleotide-disulphide oxidoreductase.
       0.508
SFN39098.1
Transcriptional regulator, ArsR family.
  
     0.421
SFN50971.1
Protein-tyrosine-phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
    0.420
SFN50982.1
Protein-tyrosine-phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
    0.415
SFN50954.1
ArsR family transcriptional regulator; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
 
   
0.414
Your Current Organism:
Mycetocola miduiensis
NCBI taxonomy Id: 995034
Other names: CGMCC 1.11101, M. miduiensis, Mycetocola miduiensis Zhu et al. 2013, Mycetocola sp. CGMCC 1.11101, NBRC 107877, strain MD-T1-10-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.