STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFO05975.1Hypothetical protein. (166 aa)    
Predicted Functional Partners:
SFN69095.1
Osmoprotectant transport system substrate-binding protein.
  
    0.785
SFN94540.1
Pyruvate dehydrogenase (quinone); Belongs to the TPP enzyme family.
   
    0.731
SFO05987.1
Mg/Co/Ni transporter MgtE (contains CBS domain).
       0.674
SFO05997.1
Uncharacterized membrane protein.
       0.674
SFO06013.1
ATP-binding protein involved in chromosome partitioning; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.
       0.670
SFO06019.1
Hypothetical protein.
       0.549
SFN67848.1
Predicted arabinose efflux permease, MFS family.
  
     0.510
SFO04501.1
PH domain-containing protein.
 
    0.451
SFN45181.1
Anti-sigma-factor antagonist.
   
    0.442
SFN96651.1
Protein of unknown function; Manually curated.
  
     0.442
Your Current Organism:
Mycetocola miduiensis
NCBI taxonomy Id: 995034
Other names: CGMCC 1.11101, M. miduiensis, Mycetocola miduiensis Zhu et al. 2013, Mycetocola sp. CGMCC 1.11101, NBRC 107877, strain MD-T1-10-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.