STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFH71084.1DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain. (230 aa)    
Predicted Functional Partners:
SFH48373.1
PAS domain S-box-containing protein.
 
 0.998
SFH70937.1
Two-component system, OmpR family, sensor histidine kinase SenX3.
 
  0.882
mshD
Mycothiol synthase; Catalyzes the transfer of acetyl from acetyl-CoA to desacetylmycothiol (Cys-GlcN-Ins) to form mycothiol.
       0.850
SFH39111.1
Signal transduction histidine kinase.
 
 0.844
SFH34548.1
His Kinase A (phospho-acceptor) domain-containing protein.
 
 0.836
SFH34625.1
Signal transduction histidine kinase.
 
 0.829
SFH48355.1
Response regulator receiver domain-containing protein.
 
 0.816
SFH31102.1
Response regulator receiver domain-containing protein.
 
 0.798
SFH26671.1
Two-component system, OmpR family, sensor kinase.
 
 0.780
SFH74581.1
Two-component system, OmpR family, sensor histidine kinase MtrB.
 
 0.760
Your Current Organism:
Cryobacterium levicorallinum
NCBI taxonomy Id: 995038
Other names: C. levicorallinum, CGMCC 1.11211, Cryobacterium levicorallinum Liu et al. 2013, Cryobacterium sp. Hh28, Cryobacterium sp. Hh34, NBRC 107883, strain Hh34
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