STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFT33807.1Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-N-acetylglucosamine synthase. (513 aa)    
Predicted Functional Partners:
SFT34785.1
Peptidoglycan/xylan/chitin deacetylase, PgdA/CDA1 family.
 
 
 0.979
SFT33817.1
Putative hydrolase.
 
     0.938
SFT64362.1
Glycosyl hydrolases family 18.
     0.921
SFT33832.1
N-acetylglucosaminyl deacetylase, LmbE family.
 
  
 0.913
SFT33823.1
Carbamoyl-phosphate synthase large subunit.
 
 
 0.897
SFT32531.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
 
 
 0.788
SFT60570.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
 
 
 0.788
SFT33798.1
Hypothetical protein.
       0.773
SFT59399.1
Diguanylate cyclase (GGDEF) domain-containing protein.
 
 
 0.761
SFT97820.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
  
 
 0.760
Your Current Organism:
Actinopolyspora righensis
NCBI taxonomy Id: 995060
Other names: A. righensis, Actinopolyspora righensis Meklat et al. 2014 emend. Nouioui et al. 2018, Actinopolyspora sp. H23, CCUG 63368, DSM 45501, MTCC 11562, strain H23
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