STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFT37991.1Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily. (539 aa)    
Predicted Functional Partners:
SFT38012.1
Peptide/nickel transport system permease protein.
 
 0.997
SFT38037.1
Peptide/nickel transport system substrate-binding protein.
 
 0.997
SFT83541.1
Oligopeptide transport system permease protein.
 
 0.989
SFT89975.1
Peptide/nickel transport system permease protein.
 
 0.989
SFT66470.1
Peptide/nickel transport system permease protein.
 
 0.988
SFT38025.1
Peptide/nickel transport system permease protein.
 
 0.981
SFT38049.1
D-amino peptidase.
 
  
  0.961
SFT55175.1
Peptide/nickel transport system permease protein.
 
 0.951
SFT76097.1
Biotin transport system permease protein.
  
 0.941
SFT55170.1
Peptide/nickel transport system permease protein.
 
 0.909
Your Current Organism:
Actinopolyspora righensis
NCBI taxonomy Id: 995060
Other names: A. righensis, Actinopolyspora righensis Meklat et al. 2014 emend. Nouioui et al. 2018, Actinopolyspora sp. H23, CCUG 63368, DSM 45501, MTCC 11562, strain H23
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.