STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFT54188.1Hypothetical protein. (359 aa)    
Predicted Functional Partners:
SFT54196.1
Hypothetical protein.
       0.773
SFT89127.1
Dipeptidyl aminopeptidase/acylaminoacyl peptidase.
  
     0.704
SFT45443.1
Hypothetical protein.
  
     0.679
SFT65802.1
PucR C-terminal helix-turn-helix domain-containing protein.
  
     0.672
SFT71631.1
PH domain-containing protein.
  
     0.667
SFT79185.1
Predicted phosphoesterase.
  
     0.663
SFT61937.1
Hypothetical protein.
  
     0.587
SFT64533.1
Hypothetical protein.
  
     0.575
SFT78701.1
Protein of unknown function.
  
     0.574
SFT84546.1
Hypothetical protein.
  
     0.556
Your Current Organism:
Actinopolyspora righensis
NCBI taxonomy Id: 995060
Other names: A. righensis, Actinopolyspora righensis Meklat et al. 2014 emend. Nouioui et al. 2018, Actinopolyspora sp. H23, CCUG 63368, DSM 45501, MTCC 11562, strain H23
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.