STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFT60817.1Pimeloyl-ACP methyl ester carboxylesterase. (267 aa)    
Predicted Functional Partners:
SFT37242.1
AMP-binding enzyme C-terminal domain-containing protein.
  
 0.894
SFT60827.1
Protein of unknown function.
       0.773
SFT36905.1
Polyketide-type polyunsaturated fatty acid synthase PfaA.
  
 0.649
SFT91553.1
SCP-2 sterol transfer family protein.
  
     0.615
guaA
GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP.
   
  0.589
SFT55452.1
Hypothetical protein.
  
     0.580
SFT64474.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
   
 
  0.572
SFT75029.1
Transcriptional regulator, PadR family.
  
     0.513
SFT36383.1
Predicted membrane protein.
  
     0.504
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.
   
  0.476
Your Current Organism:
Actinopolyspora righensis
NCBI taxonomy Id: 995060
Other names: A. righensis, Actinopolyspora righensis Meklat et al. 2014 emend. Nouioui et al. 2018, Actinopolyspora sp. H23, CCUG 63368, DSM 45501, MTCC 11562, strain H23
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