STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFT60838.1Heparin binding hemagglutinin HbhA. (274 aa)    
Predicted Functional Partners:
SFT60851.1
Helix-turn-helix.
       0.814
SFT91945.1
Hypothetical protein.
  
     0.774
SFT74225.1
Putative zinc-finger.
  
     0.772
SFT65056.1
Hypothetical protein.
  
     0.763
SFT84567.1
Hypothetical protein.
  
     0.762
SFT71983.1
Hypothetical protein.
  
     0.759
SFT91602.1
Hypothetical protein.
  
    0.759
SFT78860.1
Hypothetical protein.
  
     0.756
SFT72028.1
Hypothetical protein.
  
     0.755
SFT82340.1
Hypothetical protein.
  
     0.749
Your Current Organism:
Actinopolyspora righensis
NCBI taxonomy Id: 995060
Other names: A. righensis, Actinopolyspora righensis Meklat et al. 2014 emend. Nouioui et al. 2018, Actinopolyspora sp. H23, CCUG 63368, DSM 45501, MTCC 11562, strain H23
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.