STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFT70180.1Septum formation. (343 aa)    
Predicted Functional Partners:
SFT70197.1
Predicted Zn-dependent protease, minimal metalloprotease (MMP)-like domain.
      0.932
SFT59813.1
Hypothetical protein.
  
     0.775
SFT74580.1
Hypothetical protein.
 
     0.775
SFT78860.1
Hypothetical protein.
  
     0.775
SFT91775.1
Hypothetical protein.
  
     0.775
SFT58357.1
Dienelactone hydrolase.
  
     0.774
SFT82340.1
Hypothetical protein.
  
     0.773
SFT47458.1
Hypothetical protein.
  
     0.772
SFT74719.1
TIGR02569 family protein.
 
    0.772
SFT81364.1
Hypothetical protein.
  
    0.772
Your Current Organism:
Actinopolyspora righensis
NCBI taxonomy Id: 995060
Other names: A. righensis, Actinopolyspora righensis Meklat et al. 2014 emend. Nouioui et al. 2018, Actinopolyspora sp. H23, CCUG 63368, DSM 45501, MTCC 11562, strain H23
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.