STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFT74162.12-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase. (262 aa)    
Predicted Functional Partners:
SFT77941.1
3-hydroxybutyryl-CoA dehydrogenase.
 0.990
SFT37242.1
AMP-binding enzyme C-terminal domain-containing protein.
  
 0.908
SFT36922.1
3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratase.
  
 0.784
SFT55487.1
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase.
 
0.778
SFT61345.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaA.
 
 
  0.769
SFT61313.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaD.
 
 
  0.767
SFT54614.1
acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.758
SFT55494.1
acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.758
SFT72493.1
acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.758
SFT76117.1
acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.758
Your Current Organism:
Actinopolyspora righensis
NCBI taxonomy Id: 995060
Other names: A. righensis, Actinopolyspora righensis Meklat et al. 2014 emend. Nouioui et al. 2018, Actinopolyspora sp. H23, CCUG 63368, DSM 45501, MTCC 11562, strain H23
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