STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFT79433.1Iron-sulfur cluster assembly accessory protein; Belongs to the HesB/IscA family. (121 aa)    
Predicted Functional Partners:
SFT38179.1
Nitrogen fixation protein NifU.
  
  
 0.824
SFT38797.1
Fe-S cluster biogenesis protein NfuA, 4Fe-4S-binding domain.
  
 
 0.743
SFT54306.1
Cysteine desulfurase.
 
  
 0.725
SFT56144.1
2-oxoglutarate dehydrogenase E1 component.
  
   
 0.690
SFT61919.1
Hypothetical protein; Belongs to the GcvT family.
 
 
 0.688
SFT79448.1
Protein of unknown function.
       0.632
SFT38201.1
Fe-S cluster assembly ATP-binding protein.
  
 
 0.577
SFT61300.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE.
  
 
 0.561
SFT74260.1
ATP-binding protein involved in chromosome partitioning; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.
 
 
 0.555
SFT79474.1
Adenosylcobinamide kinase.
       0.552
Your Current Organism:
Actinopolyspora righensis
NCBI taxonomy Id: 995060
Other names: A. righensis, Actinopolyspora righensis Meklat et al. 2014 emend. Nouioui et al. 2018, Actinopolyspora sp. H23, CCUG 63368, DSM 45501, MTCC 11562, strain H23
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.