STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFT79584.1Dihydrolipoamide dehydrogenase. (456 aa)    
Predicted Functional Partners:
SFT56144.1
2-oxoglutarate dehydrogenase E1 component.
 
 0.999
SFT79597.1
2-oxoglutarate dehydrogenase E2 component.
 0.991
SFT85789.1
2-oxoisovalerate dehydrogenase E1 component.
  
 0.988
SFT65761.1
Pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase); The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).
 0.983
SFT91407.1
Pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase).
 0.982
SFT65777.1
Pyruvate dehydrogenase E1 component beta subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
 0.940
SFT91393.1
Pyruvate dehydrogenase E1 component beta subunit.
 0.940
pdhA
Pyruvate dehydrogenase E1 component alpha subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).
 
 0.934
SFT91380.1
Pyruvate dehydrogenase E1 component alpha subunit.
 
 0.932
SFT94412.1
Glutamate synthase (NADPH/NADH) large chain.
    
 0.887
Your Current Organism:
Actinopolyspora righensis
NCBI taxonomy Id: 995060
Other names: A. righensis, Actinopolyspora righensis Meklat et al. 2014 emend. Nouioui et al. 2018, Actinopolyspora sp. H23, CCUG 63368, DSM 45501, MTCC 11562, strain H23
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