STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFT81472.1Two component transcriptional regulator, LuxR family. (255 aa)    
Predicted Functional Partners:
SFT81460.1
Phage shock protein C (PspC) family protein.
 
  0.954
SFT70265.1
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
 
 0.894
SFT32261.1
Histidine kinase.
  
  0.857
SFT62392.1
Signal transduction histidine kinase.
  
  0.853
SFT58128.1
Signal transduction histidine kinase.
  
  0.851
SFT77860.1
Signal transduction histidine kinase.
 
  0.846
SFT52417.1
Signal transduction histidine kinase.
 
  0.843
SFT62466.1
Signal transduction histidine kinase.
 
  0.841
SFT36053.1
Two-component system, NarL family, sensor histidine kinase DesK.
  
  0.717
SFT32781.1
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
 
 0.707
Your Current Organism:
Actinopolyspora righensis
NCBI taxonomy Id: 995060
Other names: A. righensis, Actinopolyspora righensis Meklat et al. 2014 emend. Nouioui et al. 2018, Actinopolyspora sp. H23, CCUG 63368, DSM 45501, MTCC 11562, strain H23
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.