STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFT86582.1Sirohydrochlorin ferrochelatase. (252 aa)    
Predicted Functional Partners:
SFT67786.1
uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase.
 
 0.998
SFT67745.1
Precorrin-2 C20-methyltransferase / precorrin-3B C17-methyltransferase.
    
 0.910
SFT60440.1
uroporphyrinogen-III synthase.
  
 
 0.903
SFT86594.1
Nitrite reductase (NADH) small subunit.
 
    0.877
SFT67812.1
precorrin-6Y C5,15-methyltransferase (decarboxylating).
 
  
 0.867
SFT86648.1
Assimilatory nitrate reductase catalytic subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
     0.863
SFT86625.1
Nitrite reductase (NADH) large subunit; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
 
    0.855
SFT67704.1
precorrin-6Y C5,15-methyltransferase (decarboxylating).
    
 0.829
SFT86637.1
Assimilatory nitrate reductase electron transfer subunit.
  
    0.802
SFT33064.1
uroporphyrinogen-III synthase.
 
 
 0.787
Your Current Organism:
Actinopolyspora righensis
NCBI taxonomy Id: 995060
Other names: A. righensis, Actinopolyspora righensis Meklat et al. 2014 emend. Nouioui et al. 2018, Actinopolyspora sp. H23, CCUG 63368, DSM 45501, MTCC 11562, strain H23
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