STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFT97952.1Acyl-CoA reductase. (487 aa)    
Predicted Functional Partners:
SFT77718.1
L-proline dehydrogenase.
 
 0.944
SFT82413.1
Aldehyde dehydrogenase family protein.
 
    
0.925
SFT37242.1
AMP-binding enzyme C-terminal domain-containing protein.
  
 0.912
SFT94412.1
Glutamate synthase (NADPH/NADH) large chain.
  
 
 0.856
SFT84317.1
Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein.
  
 0.833
SFT61378.1
phenylacetate-CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA).
   
 0.687
SFT64474.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
   
 0.682
SFT56144.1
2-oxoglutarate dehydrogenase E1 component.
   
 0.662
SFT64670.1
Phthiocerol/phenolphthiocerol synthesis type-I polyketide synthase D.
   
 0.661
SFT85789.1
2-oxoisovalerate dehydrogenase E1 component.
  
 
 0.643
Your Current Organism:
Actinopolyspora righensis
NCBI taxonomy Id: 995060
Other names: A. righensis, Actinopolyspora righensis Meklat et al. 2014 emend. Nouioui et al. 2018, Actinopolyspora sp. H23, CCUG 63368, DSM 45501, MTCC 11562, strain H23
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.