STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDQ98430.1Dynamin family protein. (496 aa)    
Predicted Functional Partners:
SDQ98406.1
Dynamin family protein.
 
     0.954
gpsA
Glycerol 3-phosphate dehydrogenase (NAD(P)+); Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.
  
  
 0.837
SDQ98337.1
Regulatory protein, luxR family.
 
     0.818
dnaG
DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.
   
    0.816
SDQ98360.1
Hsp70 protein; Belongs to the heat shock protein 70 family.
 
  
 0.759
cmk
Cytidylate kinase.
  
 
 0.724
SDR18807.1
GTP-binding protein.
   
  
 0.647
SDQ33318.1
Ribosomal large subunit pseudouridine synthase B; Belongs to the pseudouridine synthase RsuA family.
  
  
 0.590
SDQ76283.1
Protein of unknown function.
  
     0.566
upp
Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate.
  
 
  0.557
Your Current Organism:
Actinopolyspora saharensis
NCBI taxonomy Id: 995062
Other names: A. saharensis, Actinopolyspora saharensis Meklat et al. 2013 emend. Nouioui et al. 2018, Actinopolyspora sp. H32, CCUG 62966, DSM 45459, strain H32
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.