STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY30598.1PFAM: DNA methylase; KEGG: cyc:PCC7424_3012 site-specific DNA-methyltransferase (cytosine-specific); SPTR: Site-specific DNA-methyltransferase (Cytosine-specific). (477 aa)    
Predicted Functional Partners:
AFY30597.1
Type II site-specific deoxyribonuclease; PFAM: Restriction endonuclease BsobI; InterPro IPR015277; KEGG: cyc:PCC7424_3013 type II site-specific deoxyribonuclease; PFAM: Restriction endonuclease, type II, AvaI/BsoBI; PRIAM: Type II site-specific deoxyribonuclease; SPTR: Type II site-specific deoxyribonuclease.
       0.779
AFY32735.1
KEGG: amr:AM1_5910 hypothetical protein; SPTR: Putative uncharacterized protein.
  
    0.476
AFY35248.1
Methyltransferase type 12; PFAM: Methyltransferase domain; InterPro IPR013217; KEGG: ava:Ava_4288 hypothetical protein; PFAM: Methyltransferase type 12; SPTR: Putative uncharacterized protein.
  
     0.453
AFY34539.1
Transposase IS4 family protein; PFAM: Transposase DDE domain; InterPro IPR002559; KEGG: naz:Aazo_0407 hypothetical protein; PFAM: Transposase, IS4-like; SPTR: Transposase, IS4 family protein.
  
     0.452
AFY30596.1
PFAM: HNH endonuclease; COGs: COG3440 restriction endonuclease; InterPro IPR003615:IPR002711; KEGG: ara:Arad_4103 hypothetical protein; PFAM: HNH endonuclease; SMART: HNH nuclease; SPTR: HNH endonuclease domain protein.
  
  
 0.405
AFY36433.1
Transposase IS891/IS1136/IS1341 family; PFAM: Helix-turn-helix domain; Putative transposase DNA-binding domain; Probable transposase; TIGRFAM: transposase, IS605 OrfB family, central region; COGs: COG0675 Transposase and inactivated derivatives; InterPro IPR001959:IPR010095; KEGG: mar:MAE_33580 transposase; PFAM: Transposase, probable, IS891/IS1136/IS1341; Transposase, IS605 OrfB, C-terminal; SPTR: Similar to tr|Q2JQ93|Q2JQ93_SYNJB ISSoc2; manually curated.
  
     0.401
Your Current Organism:
Calothrix sp. PCC7507
NCBI taxonomy Id: 99598
Other names: C. sp. PCC 7507, Calothrix sp. PCC 7507
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