STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY30687.1KEGG: cyn:Cyan7425_5333 hypothetical protein; SPTR: Putative uncharacterized protein. (530 aa)    
Predicted Functional Partners:
AFY30686.1
KEGG: cyj:Cyan7822_5623 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.792
AFY30685.1
KEGG: cyn:Cyan7425_5331 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.782
AFY30683.1
PFAM: CRISPR-associated protein (Cas_Cmr3); KEGG: cyn:Cyan7425_5329 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.515
AFY30684.1
CRISPR-associated protein, Cmr4 family; PFAM: RAMP superfamily; TIGRFAM: CRISPR type III-B/RAMP module RAMP protein Cmr4; COGs: COG1336 Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily); InterPro IPR005537; KEGG: cyj:Cyan7822_5621 hypothetical protein; PFAM: Protein of unknown function DUF324; SPTR: Putative uncharacterized protein.
       0.515
Your Current Organism:
Calothrix sp. PCC7507
NCBI taxonomy Id: 99598
Other names: C. sp. PCC 7507, Calothrix sp. PCC 7507
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.